General
Installation
API
Classes
livecellx.core.SingleCellStatic
livecellx.core.SingleCellTrajectory
livecellx.core.SingleCellTrajectoryCollection
livecellx.core.datasets.LiveCellImageDataset
livecellx.core.datasets.SingleImageDataset
livecellx.core.io_utils.LiveCellEncoder
livecellx.core.napari_visualizer.NapariVisualizer
livecellx.core.sc_key_manager.SingleCellMetaKeyManager
livecellx.core.sc_seg_operator.ScSegOperator
livecellx.core.sct_operator.SctOperator
SctOperator
livecellx.core.sct_operator.SctOperator.add_mother_daughter_relation
livecellx.core.sct_operator.SctOperator.add_new_sc
livecellx.core.sct_operator.SctOperator.annotate_click
livecellx.core.sct_operator.SctOperator.class2samples_to_annotation_data_structure
livecellx.core.sct_operator.SctOperator.clear_sc_opeartors
livecellx.core.sct_operator.SctOperator.clear_selection
livecellx.core.sct_operator.SctOperator.close
livecellx.core.sct_operator.SctOperator.connect_two_scts
livecellx.core.sct_operator.SctOperator.delete_selected_sct
livecellx.core.sct_operator.SctOperator.disconnect_sct
livecellx.core.sct_operator.SctOperator.edit_sc
livecellx.core.sct_operator.SctOperator.edit_selected_sc
livecellx.core.sct_operator.SctOperator.get_all_scs
livecellx.core.sct_operator.SctOperator.get_meta
livecellx.core.sct_operator.SctOperator.hide_function_widgets
livecellx.core.sct_operator.SctOperator.load_annotations
livecellx.core.sct_operator.SctOperator.lookup_sc_shape_index
livecellx.core.sct_operator.SctOperator.remove_empty_contour_sct
livecellx.core.sct_operator.SctOperator.remove_sc_operator
livecellx.core.sct_operator.SctOperator.remove_scs
livecellx.core.sct_operator.SctOperator.remove_shape_layer
livecellx.core.sct_operator.SctOperator.restore_shapes_data
livecellx.core.sct_operator.SctOperator.save_annotations
livecellx.core.sct_operator.SctOperator.select_shape
livecellx.core.sct_operator.SctOperator.selected_scs
livecellx.core.sct_operator.SctOperator.setup_by_timespan
livecellx.core.sct_operator.SctOperator.setup_from_sctc
livecellx.core.sct_operator.SctOperator.setup_shape_layer
SctOperator.setup_shape_layer()
livecellx.core.sct_operator.SctOperator.show_selected_mode_widget
livecellx.core.sct_operator.SctOperator.store_shape_layer_info
livecellx.core.sct_operator.SctOperator.toggle_shapes_text
livecellx.core.sct_operator.SctOperator.update_shape_layer
livecellx.core.sct_operator.SctOperator.update_shape_layer_by_sc
livecellx.core.sct_operator.SctOperator.update_shape_layer_by_track_id
livecellx.core.sct_operator.SctOperator.ADD_MOTHER_DAUGHER_MODE
livecellx.core.sct_operator.SctOperator.ANNOTATE_CLICK_MODE
livecellx.core.sct_operator.SctOperator.CONNECT_MODE
livecellx.core.sct_operator.SctOperator.DELETE_TRAJECTORY_MODE
livecellx.core.sct_operator.SctOperator.DISCONNECT_MODE
Quick Start Guide
Gallery
Livecellx Tutorials
livecellx
Classes
livecellx.core.sct_operator.SctOperator
livecellx.core.sct_operator.SctOperator.setup_shape_layer
Edit on GitHub
livecellx.core.sct_operator.SctOperator.setup_shape_layer
SctOperator.
setup_shape_layer
(
shape_layer
)
[source]